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News headlines often paint E. coli as a vicious bacterium, capable of causing disease and death to those unfortunate enough to ingest it. But that is only a tiny minority of E. coli, and a very small part of the story of this remarkable bacterium; its relationship to human health and the food we eat is much more complex. Not all E. coli are bad - in fact most are not - and some are even beneficial. On September 1st 2011, the American Academy of Microbiology convened an expert panel of microbiologists, food safety experts, and bacteriologists to develop a more accurate picture of this often maligned bacterium. This report, the product of that meeting, tells the larger story of E. coli: its role in human health, in food, and even in our understanding of our own biology.
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“Global Food Safety: Keeping Food Safe from Farm to Table,” is based on a colloquium convened by the Academy in 2009. This report reviews the current state of affairs in microbiological food safety around the world. It is extremely challenging to know how many people are made sick by food, which foods are at fault, which pathogens are most widespread or dangerous, and where those pathogens entered the food production system. In such a situation, where should research, prevention and education efforts be directed? In this report, each step in our complicated food production and supply system is described, highlighting key points of vulnerability, and making it clear that providing safe food is a shared responsibility.
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According to the report, it is possible to co-exist with resistance by- developing new strategies to prevent resistance from spreading and, where it already exists, identify the strains we need to protect against; find new ways to treat resistance infections effectively in patients; and manage reservoirs of antibiotic strains in the environment. The report summarizes the current scientific understanding of antibiotic resistance, the scope of the problem, and methods at our disposal for detecting emergence and preventing spread. The knowledge gaps about the prevalence of resistant strains and resistant infections are highlighted as are the unique problems and challenges in developing countries.
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View/Download this Report References- For more information, please see this list of works cited in the report.

Prepared by Carol Nacy and Merry Buckley. People with Crohn’s disease (CD) are seven-fold more likely to have in their gut tissues the bacterium that causes a digestive-tract disease in cattle called Johne’s disease. The role this bacterium may or may not play in causing CD is a top research priority. This report points out that the cause of Crohn’s disease is unknown, and the possible role of this bacterium, which could conceivably be passed up the food chain to people, has received too little attention from the research community.
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Prepared by Merry Buckley.
This report details the study of pathogenesis and how far we have come to having a complete understanding of pathogenesis and a phylogenetic framework for understanding the phenomenon.
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Synthesizes conclusions reached by working groups at 1999 colloquium. Takes a broad view of the problem of increasing resistance to antimicrobials and its consequences for human, animal, and environmental health. Provides an overview of the current situation and offers specific recommendations for scientific research, surveillance programs, and education effor
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Prepared by James W. Snyder and William Check.
The Academy joined with the American College of Microbiology to examine the central roles of professional microbiologists and clinicians in recognizing the occurrence of possible bioterrorism events. Issues of medical laboratory and practitioner training, emergency preparedness plans, public education, collaboration, and communication across health care and law enforcement agencies from the local to the federal level are discussed.
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Prepared by Joan B. Rose, Anwar Huq, and Erin K. Lipp.
Takes a look at the combined advances in microbiology, meteorology, climatology, epidemiology, oceanography, ecology, medicine, and space science that are shedding light on the intricate connections between weather, oceans, and emerging and re-emerging diseases. Makes specific recommendations for future data collection, research collaboration, risk assessment, and the use of technology and molecular techniques.
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Prepared by Rita R. Colwell,and Jonathan A. Patz. Discusses research issues relating to the effects of climate on the incidence and distribution of infectious disease. Addresses specific infectious diseases and offers recommendations for future research.
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Prepared by Noel R. Rose.
Assesses the impact of current and future changes in health care on clinical microbiologists and the practice of clinical microbiology. Considers issues related to changes in patient demographics, technology, the work force, and the economic environment. Discusses the clinical microbiologist as consultant and educator.
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Prepared by Harriet L. Robinson, Harold S. Ginsberg, Heather L. Davis, Stephen A. Johnston, and Margaret A. Liu.
Provides in-depth analysis of relevant issues and outlines a strategy for funding and coordinating a massive research effort to increase knowledge about the mechanism of genetic immunizations and to identify potential applications.
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